Haplogroup based filtering¶
> Edit -> Filter data … -> … based on PhyloTree
To filter out haplogroups that you don’t want to include into your analysis, the haplogroup based filtering provides two different ways:
1. The tree-based filtering offers the possibility to select one or multiple Haplogroups via a tree representation of the current version of PhyloTree.
2. Instead of selecting Haplogroups in the tree, you can also enter a comma-separated list of Haplogroups in the text field below the tree representation.
The last filtering step can be redone via Table -> Reset table.
> Edit -> Filter data … -> … haplotype filtering
Another way to filter data is the haplotype-based filtering. You can enter one or multiple Haplotypes (as a comma-separated list). This filters out all samples that do not have this haplotype.
You can also specify a distance value d. This will include all Haplotypes with the distance d to the specified ones.